Differences

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--- informatica:hp_z400_600_topspin21 [2013/02/13 14:22]
miquel [Problemes de compilació]
+++ informatica:hp_z400_600_topspin21 [2014/08/21 00:36]
miquel [Configuració del Topspin 2.1]
@@ Line 29: / Line 29: @@
 Aquestes són les tasques realitzades,
-  * :ok: ha, i verificar els mòduls detectats
+  * :ok: executar ''ha'' i verificar els mòduls detectats
   * :ok: ''cf'' funciona correctament i el fitxer de configuració final (<color black/yellow>afegir-ho!</color>) coincideix amb el del Topspin 2.1 de l'ordinador vell
   * :ok: recuperació de la configuració del Topspin 2.1 amb ''nmr_restore'' a partir del fitxer creat amb ''nmr_save'' al Topspin 2.1 de l'ordinador vell. Inicialment donava un error de compilació, però ja s'ha resolt (veure més avall).
@@ Line 116: / Line 116: @@
 ==== Problemes de compilació - Compilació de poptau i paropt ====
-La compilació del programa AU //poptau// al Topspin 2.x genera un executable que dóna un error de segmentació quan s'executa. Començo per comprovar les llibreries que crida el programa,
+La compilació del programa AU //poptau// al Topspin 2.x genera un executable que dóna un error de segmentació quan s'executa. Començo per comprovar les biblioteques que crida el programa,
 <file>
@@ Line 169: / Line 169: @@
 </file>
-i
+mentre que a l'AvanceIII 400sb no dóna cap missatge d'error,
 <file>
-# readelf -d ./poptau
+[root@cie-55-32 bin]# ldd -r poptau
+	auliba.so => not found
+	aulibp.so => not found
+	chparmod.so => not found
+	librrs.so => not found
+	liblrs.so => not found
+	editpar.so => not found
+	libacq.so => not found
+	util.so => not found
+	uni.so => not found
+	par.so => not found
+	libPath.so => not found
+	libcb.so => not found
+	libdl.so.2 => /lib/libdl.so.2 (0x00d7f000)
+	libstdc++.so.6 => /usr/lib/libstdc++.so.6 (0x0760b000)
+	libm.so.6 => /lib/tls/libm.so.6 (0x00d5a000)
+	libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x00ccb000)
+	libc.so.6 => /lib/tls/libc.so.6 (0x00101000)
+	/lib/ld-linux.so.2 (0x00524000)
+undefined symbol: ssleep	(./poptau)
+undefined symbol: PathXWinNMRProg	(./poptau)
+undefined symbol: Change_object	(./poptau)
+undefined symbol: Start_unimar	(./poptau)
+undefined symbol: DurationToAscii	(./poptau)
+undefined symbol: setcurdat	(./poptau)
+undefined symbol: RemoveTree	(./poptau)
+undefined symbol: Gets	(./poptau)
+undefined symbol: CPR_exec	(./poptau)
+undefined symbol: Show_status	(./poptau)
+undefined symbol: fetchstor	(./poptau)
+undefined symbol: getcurdat	(./poptau)
+undefined symbol: Proc_err	(./poptau)
+undefined symbol: Exit_unimar	(./poptau)
+undefined symbol: PathSystemTemp	(./poptau)
+undefined symbol: getparamunit	(./poptau)
+undefined symbol: Get_command	(./poptau)
+undefined symbol: GetCPR_object	(./poptau)
+undefined symbol: PathXWinNMRCurDir	(./poptau)
+undefined symbol: execau	(./poptau)
+</file>
-Dynamic section at offset 0xf014 contains 36 entries:
+Per altra banda, el programa //paropt// també dóna un error semblant de //segmentation fault// quan s'executa i quan se li aplica la comanda ''ldd -r''. Això podria servir per identificar el problema.
-  Tag        Type                         Name/Value
-x00000001 (NEEDED)                     Shared library: [auliba.so]
+Una cerca de ''compile*'' a la //Knowledge Database// de Bruker proporciona una possible pista,
-x00000001 (NEEDED)                     Shared library: [aulibp.so]
+  * item 9577 - workaround - TOPSPIN - 1.3.10 - non-critical - CentOS5 	TopSpin 1.3pl10 cannot compile AU programs under CentOS 5. Proporciona una nova versió del programa //makeau,// derivada de la versió distribuïda amb el TS-3.x, i esmenta que, si el directori d'instal·lació del Topspin no és ///opt/topspin//, cal modificar la primera línia del programa //makeau//
-x00000001 (NEEDED)                     Shared library: [chparmod.so]
-x00000001 (NEEDED)                     Shared library: [librrs.so]
+que, en el nostre cas, no és la causa, ja que la primera línia al fitxer //makeau// és correcte.
-x00000001 (NEEDED)                     Shared library: [liblrs.so]
-x00000001 (NEEDED)                     Shared library: [editpar.so]
+Al fitxer //opt/topspin2.1/topspin// que s'executa per configurar l'entorn de treball del Topspin i posar en marxa tots els programes i serveis requerits per executar el Topspin, ''LD_LIBRARY_PATH'' està definida com
-x00000001 (NEEDED)                     Shared library: [libacq.so]
+<file>
-x00000001 (NEEDED)                     Shared library: [util.so]
+Insert Codexport LD_LIBRARY_PATH="$szProgPath"/pvshlib:"$szProgPath"/shlib
-x00000001 (NEEDED)                     Shared library: [uni.so]
-x00000001 (NEEDED)                     Shared library: [par.so]
-x00000001 (NEEDED)                     Shared library: [libPath.so]
-x00000001 (NEEDED)                     Shared library: [libcb.so]
-x00000001 (NEEDED)                     Shared library: [libdl.so.2]
-x00000001 (NEEDED)                     Shared library: [libstdc++.so.6]
-x00000001 (NEEDED)                     Shared library: [libm.so.6]
-x00000001 (NEEDED)                     Shared library: [libgcc_s.so.1]
-x00000001 (NEEDED)                     Shared library: [libc.so.6]
-x0000000c (INIT)                       0x8048db8
-x0000000d (FINI)                       0x8055974
-x00000004 (HASH)                       0x8048148
-x00000005 (STRTAB)                     0x8048798
-x00000006 (SYMTAB)                     0x8048368
-x0000000a (STRSZ)                      834 (bytes)
-x0000000b (SYMENT)                     16 (bytes)
-x00000015 (DEBUG)                      0x0
-x00000003 (PLTGOT)                     0x8057164
-x00000002 (PLTRELSZ)                   448 (bytes)
-x00000014 (PLTREL)                     REL
-x00000017 (JMPREL)                     0x8048bf8
-x00000011 (REL)                        0x8048be0
-x00000012 (RELSZ)                      24 (bytes)
-x00000013 (RELENT)                     8 (bytes)
-x6ffffffe (VERNEED)                    0x8048b60
-x6fffffff (VERNEEDNUM)                 2
-x6ffffff0 (VERSYM)                     0x8048ada
-x00000000 (NULL)                       0x0
 </file>
+on
+<file>
+szProgPath=`"$XWINNMRHOME"/pathScript prog`
+szExpPath=`"$XWINNMRHOME"/pathScript exp`
+</file>
+és a dir, en el cas de Topspin ''LD_LIBRARY_PATH'' es defineix com la carpeta ///opt/topspin2.1/prog/shlib// on es troben totes les biblioteques que les comandes ''ldd'' de més amunt indicaven que els programes AU compilats no troben,
+<file>
+# ls -F
+Atma.so*	ipsoRout.so*	     libCUtil.so*	libhttp_channel.so	libpthread.so.0@  libtcl3.so
+auliba.so*	libacb.so*	     libDatPath.so	libhttp_transport.so	libpvacq.so	  libTimer.so*
+aulibp.so*	libacq.so*	     libDispClient.so*	libJCamp.so*		libPvPath.so	  lib_tty.so*
+Bird.so*	libap.so*	     libDispNMR.so*	libJVMAgent.so*		libPvUtil.so	  libTxBbis.so*
+Bis.so*		libAqRack.so*	     libDisp.so*	liblrs.so*		libQTP.so*	  libUpnpClient.so*
+chparmod.so*	libArg.so*	     libDispX.so*	libMo.so*		libRcuBbis.so*	  libUtil.so*
+convpw_deb.so*	libAsuBbis.so*	     libDppPars.so*	libomniCodeSets4.so.1*	librrs.so*	  libVtu.so*
+convpw.so*	libaxis_client.so    libDPP.so*		libomniORB4.so.1*	librx22.so*	  libWrap.so*
+ConvSf.so*	libaxis_xerces.so    libEdte.so*	libomnisslTP4.so.1*	lib_sbsb.so*	  libxerces-c.so.27
+editpar.so*	libBbis.so*	     libError.so*	libomnithread.so.3*	libSe451Bbis.so*  par.so*
+Error.so*	libBmpc.so*	     libFcuBbis.so*	libParxBase.so		libShapeIO.so*	  sxutil.so*
+gc.so*		libBpsu.so*	     libFunc.so*	libParx.so		libssl.so.0.9.8*  uni.so*
+Gilson.so*	libcb.so*	     libgcc_s.so@	libPath.so*		libstdc++.so@	  util.so*
+golibipso.so*	libCf.so*	     libgcc_s.so.1@	libpreamp.so*		libstdc++.so.6@
+gosim.so*	libcrypto.so.0.9.8*  libGoRec.so*	libPreemp.so*		libSwish.so*
+Hppr.so*	libCt.so*	     libhpcu.so*	libPsTul.so		libtbcload1.4.so
+</file>
+**Potser la solució passi per emprar i/o adaptar el fitxer ''makeau'' del TS-3x al TS-2x, o fer servir el ''makeau'' de l'item #9577. Però abans de provar-ho comparo els fitxers ''makeau'' del TS-2x, TS-3x, i de l'item #9577, i trobo que potser seria convenient afegir ''-m32'' a les següents definicions per LINUX de les opcions del compilador, tal i com s'ha fet als fitxers de les versions posteriors i adaptada,
+<file>
+#
+# basic cc- options
+#
+%ccopt	=(
+	  'LINUX'	=>	' -g -m32 -w' . $v_gcc,
+	  'Windows_GCC'	=>	' -g -w' . $v_gcc,
+	  'Windows_NT'	=>	' /nologo /MD /w',
+	  );
+%erropt	=(
+	  'LINUX'	=>	'-g -m32 -pedantic-errors -Wall',
+	  'Windows_GCC'	=>	'-g -pedantic-errors -Wall',
+	  'Windows_NT'	=>	'',
+	  );
+%warnopt =(
+	  'LINUX'	=>	'-g -m32 -pedantic -Wall',
+	  'Windows_GCC'	=>	'-g -pedantic -Wall',
+	  'Windows_NT'	=>	'-W3',
+	  );
+##
+</file>
+Per altra banda, no estic segur de si caldria afegir aquesta definició que surt al ''makeau'' del TS-3x,
+<file>
+my @alwaysSharedLibs = qw
+    (
+     libxerces-c
+    );
+</file>
+però que a la versió de l'itej #9577 surt com,
+<file>
+my @alwaysSharedLibs = ();
+</file>
+en tot cas, caldria tenir present que la variable definida al TS-2x seria ''@alwaysSharedLibs''.
+==== Provant el makeau de l'item #9577 ====
+<file>
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#  ./makeau -show -verbose ./src/paropt
+makeau	 ($Revision: 1.108.2.2 $ )
+  OperatingSystem=LINUX
+Setup for gcc (Bruker)
+  CC=/opt/topspin2.1/gnu/bin/gcc -B/opt/topspin2.1/gnu/lib/gcc-lib/
+  LD=/opt/topspin2.1/gnu/bin/c++ -B/opt/topspin2.1/gnu/lib/gcc-lib/ -L/opt/topspin2.1/gnu/lib-B/lib32 -B/usr/lib32
+Installed RPM packages:
+Can't exec "rpm": No such file or directory at ./makeau line 317.
+used kernel release: 2.6.32-5-amd64
+Exec /opt/topspin2.1/gnu/bin/gcc -B/opt/topspin2.1/gnu/lib/gcc-lib/ -print-search-dirs
+install: /pr/gnu/lib/gcc/i686-pc-linux-gnu/3.4.6/
+programs: =/opt/topspin2.1/gnu/lib/gcc-lib/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/lib/gcc-lib/:/opt/topspin2.1/gnu/bin/../libexec/gcc/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/bin/../libexec/gcc/:/pr/gnu/libexec/gcc/i686-pc-linux-gnu/3.4.6/:/pr/gnu/libexec/gcc/i686-pc-linux-gnu/3.4.6/:/pr/gnu/libexec/gcc/i686-pc-linux-gnu/:/pr/gnu/lib/gcc/i686-pc-linux-gnu/3.4.6/:/pr/gnu/lib/gcc/i686-pc-linux-gnu/:/usr/libexec/gcc/i686-pc-linux-gnu/3.4.6/:/usr/libexec/gcc/i686-pc-linux-gnu/:/usr/lib/gcc/i686-pc-linux-gnu/3.4.6/:/usr/lib/gcc/i686-pc-linux-gnu/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/bin/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/bin/:/pr/gnu/i686-pc-linux-gnu/bin/i686-pc-linux-gnu/3.4.6/:/pr/gnu/i686-pc-linux-gnu/bin/
+libraries: =/opt/topspin2.1/gnu/lib/gcc-lib/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/lib/gcc-lib/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/bin/../lib/gcc/:/pr/gnu/lib/gcc/i686-pc-linux-gnu/3.4.6/:/usr/lib/gcc/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/lib/i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/lib/:/pr/gnu/i686-pc-linux-gnu/lib/i686-pc-linux-gnu/3.4.6/:/pr/gnu/i686-pc-linux-gnu/lib/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../i686-pc-linux-gnu/3.4.6/:/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../:/pr/gnu/lib/i686-pc-linux-gnu/3.4.6/:/pr/gnu/lib/:/lib/i686-pc-linux-gnu/3.4.6/:/lib/:/usr/lib/i686-pc-linux-gnu/3.4.6/:/usr/lib/
+Known paths:
+  /opt/topspin2.1/gnu/bin
+  /usr/local/sbin
+  /usr/local/bin
+  /usr/sbin
+  /usr/bin
+  /sbin
+  /bin
+  /opt/topspin2.1/prog/bin
+Current environment:
+  XAUTHORITY=/var/run/gdm3/auth-for-sermnuab-sepKxp/database
+  BROWSER=/etc/alternatives/gnome-www-browser
+  GNOME_KEYRING_CONTROL=/tmp/keyring-VeaQgK
+  SSH_AUTH_SOCK=/tmp/keyring-VeaQgK/ssh
+  PWD=/opt/topspin2.1/exp/stan/nmr/au
+  LANG=en_US.UTF-8
+  USER=root
+  LOGNAME=root
+  GNOME_DESKTOP_SESSION_ID=this-is-deprecated
+  PERL_BADLANG=true
+  CORBA_CLIENT=y
+  SHLVL=2
+  UIDPATH=/opt/topspin2.1/prog/uid/%U
+  XDG_SESSION_COOKIE=9625bbc6a68066da92ea31fc00000008-1360832580.925882-1513866542
+  PATH=/opt/topspin2.1/gnu/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/topspin2.1/prog/bin
+  PERL5LIB=/opt/topspin2.1/perl/lib/perl5
+  WINDOWID=52432982
+  COLORTERM=gnome-terminal
+  GTK_MODULES=canberra-gtk-module
+  TERM=xterm
+  MICS_HOME=/opt/Bruker/mics
+  LM_LICENSE_FILE=:/usr/local/flexlm/Bruker/licenses/license.dat
+  DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-OuAzObpD9U,guid=8550eda552f6c3d67b0a389900000078
+  HOME=/root
+  LANGUAGE=en_US:en
+  SSH_AGENT_PID=2885
+  JAVA_LOGDIR=/opt/topspin2.1/prog/curdir/sermnuab
+  GNOME_KEYRING_PID=2825
+  USE_VARPATH=1
+  XFILESEARCHPATH=/opt/topspin2.1/prog/app-defaults/%N%S:/usr/lib/X11/app-defaults/%N%S
+  WINDOWPATH=7
+  DISPLAY=:0.0
+  GTK_RC_FILES=/etc/gtk/gtkrc:/home/sermnuab/.gtkrc-1.2-gnome2
+  _RLD_ARGS=-ignore_unresolved
+  ORBIT_SOCKETDIR=/tmp/orbit-sermnuab
+  GDMSESSION=default
+  MAIL=/var/mail/root
+  XWINNMRHOME=/opt/topspin2.1
+  USERNAME=sermnuab
+  _=./makeau
+  XDG_DATA_DIRS=/usr/share/gnome:/usr/share/gdm/:/usr/local/share/:/usr/share/
+  DESKTOP_SESSION=default
+  LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36:
+  GDM_LANG=en_US.utf8
+  SHELL=/bin/bash
+  OMNIORB_CONFIG=/opt/topspin2.1/prog/server/omniorb.conf
+  GPG_AGENT_INFO=/tmp/seahorse-s3nBkW/S.gpg-agent:2899:1
+  SESSION_MANAGER=local/cie-56-18:@/tmp/.ICE-unix/2849,unix/cie-56-18:/tmp/.ICE-unix/2849
+  GDM_KEYBOARD_LAYOUT=es
+LibraryExtension: .so
+StaticLibraryExtension: .a
+SharedLibraryExtension: .so
+LibraryPath: shlib
+StaticLibraryPath: lib
+SharedLibraryPath: shlib
+ObjectExtension: .o
+BinaryExtension:
+BinaryExtension:
+Check for /opt/topspin2.1/exp/stan/nmr/au/paravision_2.1.pl
+Check for /opt/topspin2.1/exp/stan/nmr/au/user_2.1.pl
+submacro(/opt/topspin2.1/prog/include/inc /opt/topspin2.1/exp/stan/nmr/au/src/paropt /opt/topspin2.1/prog/au/bin/paropt.E)
+Values of %NEEDED_LIBS
+  USE_AULIBP => USE_AULIBP
+    aulibp
+    librrs
+    liblrs
+Used libraries:
+   auliba
+   aulibp
+   chparmod
+   librrs
+   liblrs
+   editpar
+   libacq
+   util
+   aulibp
+   uni
+   par
+   libPath
+   libcb
+Included Libraries
+   auliba.so
+   aulibp.so
+   chparmod.so
+   librrs.so
+   liblrs.so
+   editpar.so
+   libacq.so
+   util.so
+   aulibp.so
+   uni.so
+   par.so
+   libPath.so
+   libcb.so
+   auliba.a
+   aulibp.a
+   chparmod.a
+   libacq.a
+   editpar.a
+   util.a
+   uni.a
+   par.a
+   libPath.a
+   libcb.a
+Combine /opt/topspin2.1/exp/stan/nmr/au/vorspann /opt/topspin2.1/prog/au/bin/paropt.E > /opt/topspin2.1/prog/au/bin/paropt.c
+Include Option: -I/opt/topspin2.1/prog/include -I/opt/topspin2.1/gnu/lib/gcc-lib/i686-pc-linux-gnu/3.4.6/include
+chdir /opt/topspin2.1/prog/au/bin
+Opersys=LINUX
+/opt/topspin2.1/gnu/bin/gcc -B/opt/topspin2.1/gnu/lib/gcc-lib/ -c -DLINUX_INTEL -D_REENTRANT -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE  -g -m32 -w -v -I/opt/topspin2.1/prog/include -I/opt/topspin2.1/gnu/lib/gcc-lib/i686-pc-linux-gnu/3.4.6/include  paropt.c
+Reading specs from /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/specs
+Configured with: ../gcc-3.4.6/configure --prefix=/pr/gnu --enable-threads=posix --enable-__cxa_atexit --enable-languages=c,c++ --with-cpu=pentium4
+Thread model: posix
+gcc version 3.4.6
+ /opt/topspin2.1/gnu/bin/../libexec/gcc/i686-pc-linux-gnu/3.4.6/cc1 -quiet -v -I/opt/topspin2.1/prog/include -I/opt/topspin2.1/gnu/lib/gcc-lib/i686-pc-linux-gnu/3.4.6/include -iprefix /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/ -isystem /opt/topspin2.1/gnu/lib/gcc-lib/include -DLINUX_INTEL -D_REENTRANT -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE paropt.c -quiet -dumpbase paropt.c -m32 -mtune=pentium4 -auxbase paropt -g -w -version -o /tmp/ccFmwAq3.s
+ignoring nonexistent directory "/opt/topspin2.1/gnu/lib/gcc-lib/include"
+ignoring nonexistent directory "/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/include"
+ignoring nonexistent directory "/pr/gnu/include"
+ignoring nonexistent directory "/pr/gnu/lib/gcc/i686-pc-linux-gnu/3.4.6/include"
+ignoring nonexistent directory "/pr/gnu/i686-pc-linux-gnu/include"
+ignoring nonexistent directory "/opt/topspin2.1/gnu/lib/gcc-lib/i686-pc-linux-gnu/3.4.6/include"
+#include "..." search starts here:
+#include <...> search starts here:
+ /opt/topspin2.1/prog/include
+ /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/include
+ /usr/local/include
+ /usr/include
+End of search list.
+GNU C version 3.4.6 (i686-pc-linux-gnu)
+	compiled by GNU C version 3.4.6.
+GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
+ /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/bin/as -V -Qy -o paropt.o /tmp/ccFmwAq3.s
+GNU assembler version 2.16.1 (i686-pc-linux-gnu) using BFD version 2.16.1
+	exit=0 sig=0 dump=0
+Used Libraries
+auliba.so aulibp.so chparmod.so librrs.so liblrs.so editpar.so libacq.so util.so aulibp.so uni.so par.so libPath.so libcb.so auliba.a aulibp.a chparmod.a libacq.a editpar.a util.a uni.a par.a libPath.a libcb.a
+/opt/topspin2.1/gnu/bin/c++ -B/opt/topspin2.1/gnu/lib/gcc-lib/ -L/opt/topspin2.1/gnu/lib-B/lib32 -B/usr/lib32  -m32 -Wl,-warn-common,-warn-constructors -v  -s  /opt/topspin2.1/prog/au/bin/paropt.o  /opt/topspin2.1/prog/shlib/auliba.so /opt/topspin2.1/prog/shlib/aulibp.so /opt/topspin2.1/prog/shlib/chparmod.so /opt/topspin2.1/prog/shlib/librrs.so /opt/topspin2.1/prog/shlib/liblrs.so /opt/topspin2.1/prog/shlib/editpar.so /opt/topspin2.1/prog/shlib/libacq.so /opt/topspin2.1/prog/shlib/util.so /opt/topspin2.1/prog/shlib/aulibp.so /opt/topspin2.1/prog/shlib/uni.so /opt/topspin2.1/prog/shlib/par.so /opt/topspin2.1/prog/shlib/libPath.so /opt/topspin2.1/prog/shlib/libcb.so /opt/topspin2.1/prog/lib/auliba.a /opt/topspin2.1/prog/lib/aulibp.a /opt/topspin2.1/prog/lib/chparmod.a /opt/topspin2.1/prog/lib/libacq.a /opt/topspin2.1/prog/lib/editpar.a /opt/topspin2.1/prog/lib/util.a /opt/topspin2.1/prog/lib/uni.a /opt/topspin2.1/prog/lib/par.a /opt/topspin2.1/prog/lib/libPath.a /opt/topspin2.1/prog/lib/libcb.a  -lm -ldl   -o paropt
+/opt/topspin2.1/gnu/bin/c++ -B/opt/topspin2.1/gnu/lib/gcc-lib/ -L/opt/topspin2.1/gnu/lib-B/lib32 -B/usr/lib32  -m32 -Wl,-warn-common,-warn-constructors -v  -s  /opt/topspin2.1/prog/au/bin/paropt.o  /opt/topspin2.1/prog/shlib/auliba.so /opt/topspin2.1/prog/shlib/aulibp.so /opt/topspin2.1/prog/shlib/chparmod.so /opt/topspin2.1/prog/shlib/librrs.so /opt/topspin2.1/prog/shlib/liblrs.so /opt/topspin2.1/prog/shlib/editpar.so /opt/topspin2.1/prog/shlib/libacq.so /opt/topspin2.1/prog/shlib/util.so /opt/topspin2.1/prog/shlib/aulibp.so /opt/topspin2.1/prog/shlib/uni.so /opt/topspin2.1/prog/shlib/par.so /opt/topspin2.1/prog/shlib/libPath.so /opt/topspin2.1/prog/shlib/libcb.so /opt/topspin2.1/prog/lib/auliba.a /opt/topspin2.1/prog/lib/aulibp.a /opt/topspin2.1/prog/lib/chparmod.a /opt/topspin2.1/prog/lib/libacq.a /opt/topspin2.1/prog/lib/editpar.a /opt/topspin2.1/prog/lib/util.a /opt/topspin2.1/prog/lib/uni.a /opt/topspin2.1/prog/lib/par.a /opt/topspin2.1/prog/lib/libPath.a /opt/topspin2.1/prog/lib/libcb.a  -lm -ldl   -o paropt
+Reading specs from /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/specs
+Configured with: ../gcc-3.4.6/configure --prefix=/pr/gnu --enable-threads=posix --enable-__cxa_atexit --enable-languages=c,c++ --with-cpu=pentium4
+Thread model: posix
+gcc version 3.4.6
+ /opt/topspin2.1/gnu/bin/../libexec/gcc/i686-pc-linux-gnu/3.4.6/collect2 --eh-frame-hdr -m elf_i386 -dynamic-linker /lib/ld-linux.so.2 -o paropt -s /usr/lib32/crt1.o /usr/lib32/crti.o /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/crtbegin.o -L/opt/topspin2.1/gnu/lib-B/lib32 -L/usr/lib32 -L/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6 -L/opt/topspin2.1/gnu/bin/../lib/gcc -L/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../../../i686-pc-linux-gnu/lib -L/opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/../../.. -warn-common -warn-constructors /opt/topspin2.1/prog/au/bin/paropt.o /opt/topspin2.1/prog/shlib/auliba.so /opt/topspin2.1/prog/shlib/aulibp.so /opt/topspin2.1/prog/shlib/chparmod.so /opt/topspin2.1/prog/shlib/librrs.so /opt/topspin2.1/prog/shlib/liblrs.so /opt/topspin2.1/prog/shlib/editpar.so /opt/topspin2.1/prog/shlib/libacq.so /opt/topspin2.1/prog/shlib/util.so /opt/topspin2.1/prog/shlib/aulibp.so /opt/topspin2.1/prog/shlib/uni.so /opt/topspin2.1/prog/shlib/par.so /opt/topspin2.1/prog/shlib/libPath.so /opt/topspin2.1/prog/shlib/libcb.so /opt/topspin2.1/prog/lib/auliba.a /opt/topspin2.1/prog/lib/aulibp.a /opt/topspin2.1/prog/lib/chparmod.a /opt/topspin2.1/prog/lib/libacq.a /opt/topspin2.1/prog/lib/editpar.a /opt/topspin2.1/prog/lib/util.a /opt/topspin2.1/prog/lib/uni.a /opt/topspin2.1/prog/lib/par.a /opt/topspin2.1/prog/lib/libPath.a /opt/topspin2.1/prog/lib/libcb.a -ldl -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /opt/topspin2.1/gnu/bin/../lib/gcc/i686-pc-linux-gnu/3.4.6/crtend.o /usr/lib32/crtn.o
+exit status is: 0  0
+</file>
+la compilació ha funcionat, ara haurem de comprovar-ho,
+<file>
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ls -l
+total 188
+-rwxrwxr-x 1 sermnuab sermnuab 42226 Feb 14 10:08 makeau
+-rw-r--r-- 1 sermnuab sermnuab 42076 Feb 13 17:05 makeau.item9577
+-rwxr-xr-x 1 sermnuab sermnuab 37702 Feb 14 09:39 makeau.ts216
+-rwxr-xr-x 1 sermnuab sermnuab 37906 Feb 11 17:12 makeau.ts216-for-debian
+drwxrwxrwx 3 nmrsu    nmrsu    12288 Feb 11 16:12 src
+-rw-rw-r-- 1 nmrsu    nmrsu     5609 Feb 28  2010 vorspann
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ls /opt/topspin2.1/prog/a
+app-defaults/ au/
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ls /opt/topspin2.1/prog/a
+app-defaults/ au/
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ls /opt/topspin2.1/prog/au/bin/paropt
+/opt/topspin2.1/prog/au/bin/paropt
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ls -l /opt/topspin2.1/prog/au/bin/paropt
+-rwxr-xr-x 1 root root 14680 Feb 14 10:08 /opt/topspin2.1/prog/au/bin/paropt
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ldd -r /opt/topspin2.1/prog/au/bin/paropt
+	linux-gate.so.1 =>  (0xf76f4000)
+	auliba.so => not found
+	aulibp.so => not found
+	chparmod.so => not found
+	librrs.so => not found
+	liblrs.so => not found
+	editpar.so => not found
+	libacq.so => not found
+	util.so => not found
+	uni.so => not found
+	par.so => not found
+	libPath.so => not found
+	libcb.so => not found
+	libdl.so.2 => /lib32/libdl.so.2 (0xf76d6000)
+	libstdc++.so.6 => /usr/lib32/libstdc++.so.6 (0xf75e1000)
+	libm.so.6 => /lib32/libm.so.6 (0xf75bb000)
+	libgcc_s.so.1 => /usr/lib32/libgcc_s.so.1 (0xf759d000)
+	libc.so.6 => /lib32/libc.so.6 (0xf7456000)
+	/lib/ld-linux.so.2 (0xf76f5000)
+/usr/bin/ldd: line 118:  2358 Segmentation fault      LD_TRACE_LOADED_OBJECTS=1 LD_WARN=yes LD_BIND_NOW=yes LD_LIBRARY_VERSION=$verify_out LD_VERBOSE= "$@"
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# ls -l /lib/ld-linux.so.2
+lrwxrwxrwx 1 root root 20 Dec  3 17:43 /lib/ld-linux.so.2 -> /lib32/ld-linux.so.2
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# file /lib/ld-linux.so.2
+/lib/ld-linux.so.2: symbolic link to `/lib32/ld-linux.so.2'
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# file /lib32/ld-linux.so.2
+/lib32/ld-linux.so.2: symbolic link to `ld-2.11.3.so'
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au# file /lib32/ld-2.11.3.so
+/lib32/ld-2.11.3.so: ELF 32-bit LSB shared object, Intel 80386, version 1 (SYSV), dynamically linked, stripped
+root@cie-56-18:/opt/topspin2.1/exp/stan/nmr/au#
+</file>
+==== Enllaços d'interès ====
+  * [[http://www3.ntu.edu.sg/home/ehchua/programming/cpp/gcc_make.html]]
+  * [[http://mindspill.net/computing/linux-notes/debugging-load-library-path-issues/]]
+  * [[http://tldp.org/HOWTO/Program-Library-HOWTO/index.html]]
+    * [[http://tldp.org/HOWTO/Program-Library-HOWTO/shared-libraries.html]]

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