Tag Archives: conformational-study

Conformational Bias of Several Types of γ-Peptides

2013-04-15Our Publicationsconformational-study, heterochirality, homochirality, hydrogen-bonds, peptides, peptidomimeticsPau

“The Role of the Chiral cis-1,3-Disubstituted 2,2-Dimethylcyclobutane Motif in the Conformational Bias of Several Types of γ-Peptides” by Jordi Aguilera^,Juan A. Cobos, Raquel Gutiérrez-Abad, Carles Acosta, Pau Nolis, Ona Illa, Rosa M. Ortuño. Eur. J. Org. Chem. 2013 (early view). DOI: 10.1002/ejoc.201300066

Three series of new γ-peptides have been synthesized by starting from conveniently protected cis-3-amino-2,2-dimethylcyclobutane-1-carboxylic acid derivatives. The first series is constructed with only one enantiomer of this γ-amino acid, whereas in the second one both enantiomeric cyclobutane residues are joined in alternating fashion. Continue reading Conformational Bias of Several Types of γ-Peptides →

Chiral secondary structure in β-peptides determined by NMR

2012-10-04Our Publicationschirality, conformational-study, foldamers, hydrogen-bonds, peptides, secondary structuresPau

“Secondary Structure of Short β-Peptides as the Chiral Expression of Monomeric Building Units: a Rational and Predictive Model”Esther Gorrea, Gabor Pohl, Pau Nolis, Sergio Celis, Kepa K Burusco, Vicenç Branchadell, András Perczel, and Rosa M. Ortuño. Journal Of Organic Chemistry. ACCEPTED 2012 DOI: 10.1021/jo302034b

Chirality of the monomeric residues controls and determines the prevalent folding of small oligopeptides (from di- to tetramers) composed of the 2-aminocyclobutane-1-carboxylic acid (ACBA) derivatives with the same or different absolute and relative configuration. The cis-form of the monomeric ACBA gives rise to two conformers, namely Z6 and Z8, while the trans-form manifests uniquely as an H8 structure. Continue reading Chiral secondary structure in β-peptides determined by NMR →

Designing hybrid foldamers

2011-10-16Our Publicationsconformational-study, foldamers, hydrogen-bonds, peptides, secondary structuresPau

“Designing hybrid foldamers: The effect on the peptide conformational bias of beta- versus alpha- and gamma-linear residues in alternation with (1R,2S)-2-aminocyclobutane-1-carboxylic acid” Sergi Celis, Esther Gorrea, Pau Nolis, Ona Illa, Rosa Maria Ortuño. Organic and Biomolecular Chemistry. Volume 10, Pages 861-868, October 2011 DOI: 10.1039/C1OB06575K

Several oligomers constructed with (1R,2S)-2-aminocyclobutane-1-carboxylic acid and glycine, beta-alanine, and gamma-amino butyric acid (GABA), respectively, joined in alternation have been synthesized and studied by means of NMR and CD experiments as well as with computational calculations. Continue reading Designing hybrid foldamers →

Structural study of γ,γ-peptides

2011-05-19Our Publicationschirality, conformational-study, hydrogen-bonds, nanometric size, peptides, secondary structures, self-assembly, vesiclesPau

“Synthesis and structural study of highly constrained hybrid cyclobutane-proline γ,γ-peptides” by R. Gutiérrez-Abad, D. Carbajo, P. Nolis, C. Acosta-Silva, J. A. Cobos, O. Illa, M. Royo and R. Ortuño. Aminoacids, Volume 41, pages 673-686, 2011. DOI: 10.1007/s00726-011-0912-4.

Two diastereomeric series of hybrid γ,γ-peptides derived from conveniently protected derivatives of (1R,2S)- and (1S,2R)-3-amino-2,2-dimethylcyclobutane-1-carboxylic acid and cis-4-amino-l-proline joined in alternation have efficiently been prepared through convergent synthesis. Continue reading Structural study of γ,γ-peptides →

Trans-cyclobutane β-dipeptides form organogels

2011-05-19Our Publicationschirality, conformational-study, hydrogen-bonds, molecular modeling, organogels, peptides, self-assemblyPau

“Self-Assembly of trans-Cyclobutane-Containing β-Dipeptides into Ordered Aggregates”,by E. Gorrea, P. Nolis, E. Torres, E. Da Silva, D. Amabilino, V. Branchadell and R. Ortuño; Chemistry – A European Journal, Volume 17, Issue 16, pages 4588–4597, April 11, 2011. DOI: 10.1002/chem.201002193

Two chiral synthetic β-dipeptides have been constructed, one with two trans-cyclobutane residues and the other with one trans and one cis fragment, 1 and 2, respectively, and investigated to get insight into the non-covalent interactions responsible for their self-assembly to form ordered aggregates, as well into parameters such as their morphology and size. Continue reading Trans-cyclobutane β-dipeptides form organogels →

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