Tag Archives: pure-shift NMR

Simultaneous Enantiospecific Detection of Multiple Compounds in Mixtures using NMR Spectroscopy

2020-10-02Methods & Applications, Our Publications, Our Research13C-NMR, chiral recognition, chirality, enantiodifferentiation, enantiospecific, metabolic profiling, metabolites, metabolomics, metabonomics, mixture, nmr metholodogy, pure-shift NMR, simultaneousMiriam

Simultaneous Enantiospecific Detection of Multiple Compounds in Mixtures using NMR Spectroscopy, by Lars T. Kuhn, Kumar Motiram-Corral, Toby J. Athersuch, Teodor Parella, Míriam Pérez-Trujillo*

Angew. Chem. Int. Ed., 2020 / doi:10.1002/anie.202011727

Chirality plays a fundamental role in nature, but its detection and quantification still face many limitations. To date, the enantiospecific analysis of mixtures necessarily requires prior separation of the individual components. The simultaneous enantiospecific detection of multiple chiral molecules in a mixture represents a major challenge, which would lead to a significantly better understanding of the underlying biological processes; e.g. via enantiospecifically analysing metabolites in their native environment. Here, we report on the first in situ enantiospecific detection of a thirty‐nine‐component mixture. As a proof of concept, eighteen essential amino acids at physiological concentrations were simultaneously enantiospecifically detected using NMR spectroscopy and a chiral solvating agent. This work represents a first step towards the simultaneous multicomponent enantiospecific analysis of complex mixtures, a capability that will have substantial impact on metabolism studies, metabolic phenotyping, chemical reaction monitoring, and many other fields where complex mixtures containing chiral molecules require efficient characterisation.

^{Simultaneous enantiospecific detection of a mixture of amino acids by NMR spectroscopy}

This work has been selected to be presented as a talk at 2021 scientific conferences:

· 42nd FGMR (German Chemical Society, Magnetic Resonance Section) Annual Discussion Meeting – Virtual, Sep 27 to Oct 1.

· SMASH- Small Molecule NMR Conference 2021 – Virtual, Aug 30 to Sep 2.

· Euromar 2021 Conference – Virtual, 5 to 8 July.

· 10th GERMN (Spanish NMR group of the Real Sociedad Española de Química) biennial & 9th IberoAmerican NMR Meeting – Virtual, 26 to 19 April.

PhD Thesis: New Applications of Covariance NMR and Experimental Development for Measurements of Homonuclear Coupling Constants in Overlapping Signals

2018-04-03Methods & Applications, News from the SeRMN, Our Researchcoupling-constants, covariance NMR, enhanced resolution, full sensitivity, Generalized Indirect Covariance, homonuclear decoupling, HSQC, HSQMBC, J-resolved, perfect HSQC, PhD Thesis, PIP experiments, pure in-phase signals, pure-shift NMRAndre

On 21st March 2018 I sucessfully defended my PhD Thesis entitled: “New Applications of Covariance NMR and Experimental Development for Measurements of Homonuclear Coupling Constants in Overlapping Signals” (ISBN: 9788449079252), supervised by Dr. Teodor Parella and Dr. Pau Nolis, and obtained the degree of Ph.D. in Chemistry at the Department of Chemistry, Universitat Autònoma de Barcelona.

The thesis can be downloaded in PDF format from the TDX repository and from the TESEO repository.

Accurate measurement of proton homonuclear coupling constants in overlapped signals by using a doubly-selective TOCSY G-SERF experiment.

Abstract

The experimental results obtained in this thesis are presented in the form of three papers published in NMR specialised scientific peer-reviewed journals.

Exploring the use of Generalized Indirect Covariance to Reconstruct Pure shift NMR Spectra: Current Pros and Cons. André Fredi, Pau Nolis, Carlos Cobas, Gary E. Martin and Teodor Parella. Journal of Magnetic Resonance, Volume 266, May 2016, Pages 16-22. DOI: 10.1016/j.jmr.2016.03.003
Access to experimentally infeasible spectra by pure-shift NMR covariance. André Fredi, Pau Nolis, Carlos Cobas and Teodor Parella. Journal of Magnetic Resonance, Volume 270, September 2016, Pages 161-168. DOI: 10.1016/j.jmr.2016.07.010
Accurate measurement of JHH in overlapped signals by a TOCSY‐edited SERF Experiment. André Fredi, Pau Nolis and Teodor Parella. Magnetic Resonance in Chemistry, Volume 55, Issue 6, June 2017, Pages 525-529. DOI: 10.1002/mrc.4572

The first two articles deal with the use of covariance NMR as a general method to generate novel psNMR spectra. The last work describes a new selTOCSY G-SERF experiment, for accurately measuring JHH in overlapped regions.

The first publication describes a novel general protocol to generate psNMR spectra by Covariance NMR. This new approach is unique in NMR spectroscopy; giving a cheap, fast an easy way to reconstruct psNMR spectra without spending time in the spectrometer. This new strategy has been referenced to as psNMR Covariance.

The concept of psNMR Covariance has been extended in the second publication by inserting Multiplicity-Edited (ME) information into 2D experiments that are difficult or even impossible to achieve experimentally. It is shown how the ME information can be efficiently transferred to a set of homonuclear and heteronuclear 2D NMR spectra by Covariance processing, reconstructing new psME spectra in a fast way. Finally, G-SERF and related methods only work for isolated 1H signals on which selective excitation can be successfully applied.

Unfortunately, as it happens in other frequency-selective experiments, this approach fails for overlapped signals. A doubly-selective TOCSY G-SERF scheme is presented in the third publication to circumvent this limitation, by measuring JHH efficiently even for protons resonating in crowded regions.

Access to experimentally infeasible spectra by pure-shift NMR covariance

2016-10-04Methods & Applications, Our Publications, Our Research2D DIAG, coavriance, enhanced resolution, Generalized Indirect Covariance, homodecoupling, homonuclear decoupling, HSQC, HSQMBC, HSQMBC-TOCSY, indirect covariance, NOESY, NUS, psGIC, Pure shift, pure-shift NMRAndre

Access to experimentally infeasible spectra by pure-shift NMR covariance. André Fredi, Pau Nolis, Carlos Cobas and Teodor Parella. Journal of Magnetic Resonance, Volume 270, September 2016, Pages 161-168. DOI: 10.1016/j.jmr.2016.07.010

Abstract: Covariance processing is a versatile processing tool to generate synthetic NMR spectral representations without the need to acquire time-consuming experimental datasets. Here we show that even experimentally prohibited NMR spectra can be reconstructed by introducing key features of a reference 1D CHn-edited spectrum into standard 2D spectra. This general procedure is illustrated with the calculation of experimentally infeasible multiplicity-edited pure-shift NMR spectra of some very popular homonuclear (ME-psCOSY and ME-psTOCSY) and heteronuclear (ME-psHSQC-TOCSY and ME-psHMBC) experiments.

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André Fredi’s oral presentation at 8th GERMN / 5th Iberian NMR Meeting

2016-07-20Methods & Applications, News from the SeRMN, NMR Events & Courses, Our Publications, Our Researchcovariance, covariance NMR, Generalized Indirect Covariance, homodecoupling, homonuclear decoupling, nmr, psGIC, Pure shift, pure-shift NMRAndre

André Fredi made an oral presentation at the 8th GERMN / 5th Iberian NMR Meeting (GERMN 2016) held in Valencia, Spain from 27th to 29th June 2016.

In his presentation, that was titled “Exploring the use of Generalized Indirect Covariance to reconstruct Pure Shift NMR spectra: Current Pros and Cons”, André explained how to make pure spectra shift from Generalized Indirect Covariance processing (psGIC). This new method is basically a new way to get “synthetic” pure shift spectra without the need to purchase a pure shift spectrum in the spectrometer and without the penalties that pure-shift experiments cause.

André has been working as a Ph.D. candidate at the Department of Chemistry and SeRMN under the direction of Dr. Teodor Parella and Dr. Pau Nolis since November 2014, when he enrolled in the Department of Chemistry doctoral program at Universitat Autònoma de Barcelona with a fellowship from CNPq-Brazil. He is currently in his second year and expects to defend the doctoral thesis on 2017/2018.

Presentations at the EUROMAR 2016 Conference

2016-07-20Methods & Applications, News from the SeRMN, NMR Events & Courses, Our Researchcovariance NMR, Generalized Indirect Covariance, homodecoupling, HSQC, HSQMBC, psGIC, pure-shift NMRAndre

André Fredi (PhD student) and Teodor Parella presented our last research works at the annual meeting of the European magnetic resonance community EUROMAR 2016 Conference that was celebrated on days 3th to 7th July in Aarhus, Denmark. Find below a summary of our contributions. Continue reading Presentations at the EUROMAR 2016 Conference →

Exploring the use of Generalized Indirect Covariance to Reconstruct Pure shift NMR Spectra: Current Pros and Cons.

2016-03-14Methods & Applications, News from the SeRMN, Our Publications, Our Research2D DIAG, coavriance, enhanced resolution, Generalized Indirect Covariance, homodecoupling, homonuclear decoupling, HSQC, HSQMBC, HSQMBC-TOCSY, indirect covariance, NOESY, NUS, psGIC, Pure shift, pure-shift NMRAndre

Title: Exploring the use of Generalized Indirect Covariance to Reconstruct Pure shift NMR Spectra: Current Pros and Cons.
Authors: André Fredi, Pau Nolis, Carlos Cobas, Gary E. Martin and Teodor Parella.
DOI: 10.1016/j.jmr.2016.03.003

ABSTRACT: The current pros and cons of a processing protocol to generate pure chemical shift NMR spectra using Generalized Indirect Covariance are presented and discussed. The transformation of any standard 2D homonuclear and heteronuclear spectrum to its pure shift counterpart by using a reference DIAG spectrum is described. Reconstructed pure shift NMR spectra of NOESY, HSQC, HSQC-TOCSY and HSQMBC experiments are reported for the target molecule strychnine.

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PhD Thesis: Development and application of modern pure shift NMR techniques and improved HSQC and HSQMBC experiments

2015-07-27Methods & Applications, News from the SeRMN, Our Researchcoupling-constants, enhanced resolution, full sensitivity, HOBS, homonuclear decoupling, HSQC, HSQMBC, perfect HSQC, PhD Thesis, PIP experiments, pure in-phase signals, pure-shift NMR, residual dipolar couplings, SAPS-HSQC, sensitivity enhancementLaura

Last 16^st July 2015 I defended my PhD Thesis entitled: Development and application of modern pure shift NMR techniques and improved HSQC/HSQMBC experiments.

The present doctoral thesis is framed within the Nuclear Magnetic Resonance (NMR) spectroscopy field, more specifically in the design of modern NMR methodologies. The research work carried out is focused on the design and application of new and modern NMR methodologies (i) to perform efficient broadband ¹H homodecoupling in 1D/2D NMR experiments and (ii) to accurately determine homo- and heteronuclear coupling constants in isotropic and anisotropic conditions through improved HSQC and HSQMBC-type experiments. The thesis is presented as a compendium ten (10) publications that have been published in several peer-reviewed international scientific journals as original research papers. Continue reading PhD Thesis: Development and application of modern pure shift NMR techniques and improved HSQC and HSQMBC experiments →

Ultra-high-resolved NMR: Analysis of complex mixtures of compounds with near-identical ¹H and ¹³C NMR spectra

2015-07-20Methods & Applications, Our Publications, Our Researchenhanced resolution, HOBS, HOBS-HSQC, HOBS-HSQC-TOCSY, HOBS-HSQMBC, homodecoupling, homonuclear decoupling, NUS, Pure shift, pure-shift NMR, spectral aliasingLaura

Title: Disentangling complex mixtures of compounds with near-identical ¹H and ¹³C NMR spectra using pure shift NMR.
Authors: L. Castañar, R. Roldán, P. Clapés, A. Virgili and T. Parella.
Reference: Chem. Eur. J., 2015, 21, 7682-7685.
DOI: 10.1002/chem.201500521

Abstract: The thorough analysis of highly complex NMR spectra using pure shift NMR experiments is described. The enhanced spectral resolution obtained from modern 2D HOBS experiments incorporating spectral aliasing in the ¹³C indirect dimension enables the distinction of similar compounds exhibiting near-identical ¹H and ¹³C NMR spectra. It is shown that a complete set of extremely small Δδ(1H) and Δδ(13C) values, even below the natural line width (1 and 5 ppb, respectively), can be simultaneously determined and assigned.

References:

“Full sensitivity and enhanced resolution in homodecoupled band-selective NMR experiments” Chem. Eur. J. 2013, 19, 17283-17286.

“Simultaneous ¹H and ¹³C NMR enantiodifferentiation from highly-resolved pure shift HSQC spectra” Chem. Commun. 2014 50, 10214-10217.

“Implementing homo- and heterodecoupling in region-selective HSQMBC experiments” J. Magn. Reson. 2014, 238, 63-69.

Pulse Programs Code for Bruker:

2D HOBS-HSQC-TOCSY

Data set Example:

Mixture

Review: Recent Advances in Small Molecule NMR: Improved HSQC and HSQMBC Experiments

2015-03-02Methods & Applications, NMR Bibliography, Our Publications, Our ResearchHOBS-HSQC, HOBS-HSQMBC, HSQC, HSQMBC, IPAP, nmr, one-bond proton-carbon coupling constants, perfect HSQC, PIP experiments, proton-carbon coupling constants, pure-shift NMR, quantitative nmr, SAPS-HSQCLaura

“Recent Advances in Small Molecule NMR: Improved HSQC and HSQMBC Experiments” by Laura Castañar and Teodor Parella. Annual Reports on NMR Spectroscopy, 2015, 84:163–232. DOI: 10.1016/bs.arnmr.2014.10.004

A general description of the latest developments in heteronuclear single-quantum correlation and heteronuclear single-quantum multiple bond correlation experiments designed for small molecules at the natural isotopic abundance is reported. Continue reading Review: Recent Advances in Small Molecule NMR: Improved HSQC and HSQMBC Experiments →

SeRMN presentations at the 2014 Ibero-American NMR & GERMN Bienal & Iberian NMR meeting

2014-09-15Methods & Applications, NMR Events & Courses, Our Researchchirality, enantiodifferentiation, enhanced resolution, full sensitivity, HOBS, HOBS-TOCSY, homodecoupling, homonuclear decoupling, multipl, pure-shift NMRLaura

Some of our last research work will be presented next week at the VI Ibero-American NMR – VII GERMN Bienal – IV Iberian NMR joint meeting that will take place in Alcalá de Henares, Madrid (Spain) from 22^nd to 25^th September. Find below a summary of our contributions.

Laura Castañar presents an oral communication and a poster entitled “Enantiodifferentiation throgh frequency-selective pure shift ¹H NMR”. NMR-aided discrimination of enantiomers using chiral solvating agents (CSAs) is a well established method to carry out enantiodifferentiation studies. Continue reading SeRMN presentations at the 2014 Ibero-American NMR & GERMN Bienal & Iberian NMR meeting →

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